Raman spectroscopy, a non-destructive solution to the study of glass and its alteration

This paper presents the potential of Raman spectroscopy, a non-destructive technique which can be applied in-situ, for the analyses of glass and their alteration. Recent analytical developments are summarised for different glass composition and practical examples are given. The paper describes how to extract compositional information from the glass, first based on the spectra profile to distinguish rapidly alkali silicate from alkaline-earth alkali silicate and lead alkali silicate glass, then using the spectral decomposition and correlations to extract quantitative data. For alkali silicate glasses, that are most prone to alteration, the spectral characteristics are described to interpret the alteration process (selective leaching or dissolution of the glass) from the Raman spectra of the altered glass. These developments have greatly widened the potential of the technique and supplement well its ability to measure the thickness of the altered layer and identify the crystalline deposits

Chilean sport sciences scientific production indexed in the Web of Science (1981-2016)

9 p.Objetivo: realizar un análisis bibliométrico de la producción científica chilena de Ciencias del deporte indexada en la Web of Science hasta 2016. Métodos: se analizaron los artículos y revisiones de Ciencias del deporte de Chile incluidos en los índices de la Colección principal de Web of Science hasta 2016. Los datos se recopilaron y filtraron en el programa Endnote X6 y luego se exportaron a Excel 2013, Bibexcel e Histcite para su análisis. La bibliometría se centró en la productividad, los sujetos y los patrones de colaboración. Resultados: Se encontraron un total de 152 documentos publicados desde 1981 hasta 2016. Las ciencias de la vida fueron el área de investigación principal (104), mientras que la fisiología (36) y la teoría del entrenamiento deportivo (30) fueron los sujetos más representados. La media de autores por artículo fue de 5,26 y el porcentaje de colaboración estuvo principalmente entre el 94% y el 100%. Ramírez-Campillo fue el autor más prolífico (24) y Caniuqueo logró el mayor índice de colaboración (10.83). Se descubrieron dos redes, con 20 y 10 académicos respectivamente y que representan 19 instituciones diferentes. Un grupo de 53 revistas diferentes ha difundido publicaciones de Ciencias del Deporte de Chile, pero 12 de ellas recolectaron el 60.53% de la producción total. Conclusión: la producción científica chilena de Ciencias del Deporte indexada en la Web of Science muestra el desarrollo progresivo y el fortalecimiento de este campo del conocimiento, claramente orientado a las Ciencias de la Vida, el trabajo en equipo y la colaboración internacional. También se debe destacar el establecimiento de una red que incluye académicos de Australia, Brasil, Canadá, Chile y España, que está impulsando la investigación de Ciencias del Deporte en este paísS

Metallic ions as therapeutic agents in tissue engineering scaffolds: an overview of their biological applications and strategies for new developments

This article provides an overview on the application of metallic ions in the fields of regenerative medicine and tissue engineering, focusing on their therapeutic applications and the need to design strategies for controlling the release of loaded ions from biomaterial scaffolds. A detailed summary of relevant metallic ions with potential use in tissue engineering approaches is presented. Remaining challenges in the field and directions for future research efforts with focus on the key variables needed to be taken into account when considering the controlled release of metallic ions in tissue engineering therapeutics are also highlighted

Using Semantic Web technologies in the development of data warehouses: A systematic mapping

The exploration and use of Semantic Web technologies have attracted considerable attention from researchers examining data warehouse (DW) development. However, the impact of this research and the maturity level of its results are still unclear. The objective of this study is to examine recently published research articles that take into account the use of Semantic Web technologies in the DW arena with the intention of summarizing their results, classifying their contributions to the field according to publication type, evaluating the maturity level of the results, and identifying future research challenges. Three main conclusions were derived from this study: (a) there is a major technological gap that inhibits the wide adoption of Semantic Web technologies in the business domain;(b) there is limited evidence that the results of the analyzed studies are applicable and transferable to industrial use; and (c) interest in researching the relationship between DWs and Semantic Web has decreased because new paradigms, such as linked open data, have attracted the interest of researchers.This study was supported by the Universidad de La Frontera, Chile, PROY. DI15-0020. Universidad de la Frontera, Chile, Grant Numbers: DI15-0020 and DI17-0043

Genetic and Physiological Analysis of Iron Biofortification in Maize Kernels

BACKGROUND: Maize is a major cereal crop widely consumed in developing countries, which have a high prevalence of iron (Fe) deficiency anemia. The major cause of Fe deficiency in these countries is inadequate intake of bioavailable Fe, where poverty is a major factor. Therefore, biofortification of maize by increasing Fe concentration and or bioavailability has great potential to alleviate this deficiency. Maize is also a model system for genomic research and thus allows the opportunity for gene discovery. Here we describe an integrated genetic and physiological analysis of Fe nutrition in maize kernels, to identify loci that influence grain Fe concentration and bioavailability. METHODOLOGY: Quantitative trait locus (QTL) analysis was used to dissect grain Fe concentration (FeGC) and Fe bioavailability (FeGB) from the Intermated B73 × Mo17 (IBM) recombinant inbred (RI) population. FeGC was determined by ion coupled argon plasma emission spectroscopy (ICP). FeGB was determined by an in vitro digestion/Caco-2 cell line bioassay. CONCLUSIONS: Three modest QTL for FeGC were detected, in spite of high heritability. This suggests that FeGC is controlled by many small QTL, which may make it a challenging trait to improve by marker assisted breeding. Ten QTL for FeGB were identified and explained 54% of the variance observed in samples from a single year/location. Three of the largest FeGB QTL were isolated in sister derived lines and their effect was observed in three subsequent seasons in New York. Single season evaluations were also made at six other sites around North America, suggesting the enhancement of FeGB was not specific to our farm site. FeGB was not correlated with FeGC or phytic acid, suggesting that novel regulators of Fe nutrition are responsible for the differences observed. Our results indicate that iron biofortification of maize grain is achievable using specialized phenotyping tools and conventional plant breeding techniques

Batch effect correction for genome-wide methylation data with Illumina Infinium platform

<p>Abstract</p> <p>Background</p> <p>Genome-wide methylation profiling has led to more comprehensive insights into gene regulation mechanisms and potential therapeutic targets. Illumina Human Methylation BeadChip is one of the most commonly used genome-wide methylation platforms. Similar to other microarray experiments, methylation data is susceptible to various technical artifacts, particularly batch effects. To date, little attention has been given to issues related to normalization and batch effect correction for this kind of data.</p> <p>Methods</p> <p>We evaluated three common normalization approaches and investigated their performance in batch effect removal using three datasets with different degrees of batch effects generated from HumanMethylation27 platform: quantile normalization at average β value (QNβ); two step quantile normalization at probe signals implemented in "lumi" package of R (lumi); and quantile normalization of A and B signal separately (ABnorm). Subsequent Empirical Bayes (EB) batch adjustment was also evaluated.</p> <p>Results</p> <p>Each normalization could remove a portion of batch effects and their effectiveness differed depending on the severity of batch effects in a dataset. For the dataset with minor batch effects (Dataset 1), normalization alone appeared adequate and "lumi" showed the best performance. However, all methods left substantial batch effects intact in the datasets with obvious batch effects and further correction was necessary. Without any correction, 50 and 66 percent of CpGs were associated with batch effects in Dataset 2 and 3, respectively. After QNβ, lumi or ABnorm, the number of CpGs associated with batch effects were reduced to 24, 32, and 26 percent for Dataset 2; and 37, 46, and 35 percent for Dataset 3, respectively. Additional EB correction effectively removed such remaining non-biological effects. More importantly, the two-step procedure almost tripled the numbers of CpGs associated with the outcome of interest for the two datasets.</p> <p>Conclusion</p> <p>Genome-wide methylation data from Infinium Methylation BeadChip can be susceptible to batch effects with profound impacts on downstream analyses and conclusions. Normalization can reduce part but not all batch effects. EB correction along with normalization is recommended for effective batch effect removal.</p

Geology and petrogenetic considerations of the Loma Marcelo skarn, Neoproterozoic basement of the Ventania System, Argentina

The Late Precambrian–Early Palaeozoic crystalline basement of the Ventania System is mainly composed of Neoproterozoic S-type granites, Early Cambrian alkaline granites, and Middle Cambrian peralkaline rhyolites. The Neoproterozoic granites (ca. 607–581 Ma) crop out in the Cerro Pan de Azúcar-Cerro del Corral area and host the Loma Marcelo Ca/Mg skarn, composed of calc-silicate- and chondrodite-bearing assemblages. Petrographical, geochemical, and geochronological data indicate that the skarn was formed from carbonate xenoliths of sedimentary nature incorporated during the intrusion of the Neoproterozoic granites and that it is the result of three successive metamorphic events. The first one is related to the incorporation of carbonate xenoliths by the intrusion and the associated contact metamorphism. The second event is linked to the crystallization of the Early Cambrian granites and related post-magmatic processes. They are responsible for fluorine influx into the Neoproterozoic basement, which resulted in the formation of high-F minerals in the Loma Marcelo skarn (e.g. vesuvianite, chondrodite). The Sm-Nd garnet-whole rock isochron age of 526.8 ± 12.0 Ma in the skarn confirms its relationship with the Early Cambrian magmatism. The last event corresponds to a regional metamorphism assigned to the Late Devonian–Early Carboniferous on the basis of a LA-ICP-MS U-Pb age of 353.4 ± 6.7 Ma determined on zircons of the skarn as well as a Rb-Sr quartz-sericite isochron age of 364.4 ± 3.6 Ma obtained from a quartz vein that post-tectonically cuts the already mylonitized granites. The different chemical compositions of the carbonate protoliths determined the formation of two types of skarns of calcic and magnesian compositions. A single date of the calcic skarn defined a LA-ICP-MS U-Pb upper intercept age of 648 ± 21 Ma, providing the maximum sedimentation age for the calcic protolith of the Loma Marcelo skarn. The minimum sedimentation age is provided by the crystallization age of the S-type granite surrounding the skarn (ca. 607 Ma). The Loma Marcelo skarn reveals the occurrence of underground Neoproterozoic carbonate (meta-?) sedimentary rocks as part of the basement of the Ventania System. These rocks could correlate with the carbonate sequences of the neighbouring Claromecó Basin and Tandilia System.Facultad de Ciencias Naturales y MuseoInstituto de Recursos MineralesCentro de Investigaciones Geológica